This is the official documentation of the Deformability Cytometry Open Repository (DCOR), a public repository for real-time deformability cytometry (RT-DC) datasets hosted by the Max-Planck-Gesellschaft.

Documentation

Contents:

• Introduction
  • Background
  • DCOR is open and free
  • Technology
• Using DCOR
  • Accessing Data on DCOR
    • General remarks
    • Access via DCOR-Aid GUI
    • Access via DCOR-Aid Python library
  • Uploading data to DCOR
    • Prerequisites
    • Data preparation with DCKit
    • Data upload with DCOR-Aid
    • Generating DCOR-Aid upload tasks
  • Sharing (private) data with others
    • Permission system
    • Circles: Sharing with colleagues
    • Collections: Sharing for collaborators
    • Datasets: Simple sharing
  • Citing data on DCOR
• Frequently Asked Questions
  • Can I upload a test dataset somewhere?
  • What happens in the background when I upload a dataset?
• Self-Hosting
  • Installation
    • Ubuntu and CKAN
    • DCOR Extensions
    • SSL
    • Unattended upgrades
  • Operations and maintenance
    • Creating an encrypted access token
    • Creating an encrypted database backup
  • Upgrading DCOR
    • DCOR only
    • Upgrading CKAN/DCOR
  • Troubleshooting
• DCOR Development
  • Ubuntu and CKAN
  • DCOR Extensions
    • Installation
    • Initialization
  • Load some test data into the database
  • robots.txt
  • Important commands
    • System
    • CLI

Indices and tables

• Index

• Module Index

• Search Page